STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JN40HMG box domain-containing protein. (797 aa)    
Predicted Functional Partners:
A0A4Z1JNZ6
Protein disulfide-isomerase.
    
   0.842
A0A4Z1K2H4
Uncharacterized protein.
    
 0.799
A0A4Z1JGR8
HTH araC/xylS-type domain-containing protein.
    
 0.746
A0A4Z1JH18
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
 
  
   0.740
A0A4Z1JVF8
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.691
A0A4Z1KDG9
HMG box domain-containing protein.
    
 0.684
A0A4Z1JL39
Uncharacterized protein.
 
  
 0.641
A0A4Z1JDT9
Uridine kinase; Belongs to the uridine kinase family.
    
 0.620
A0A4Z1JUK3
Uncharacterized protein.
    
 0.620
A0A4Z1JYU2
Uncharacterized protein.
    
 0.620
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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