STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JQI4Beta_elim_lyase domain-containing protein. (406 aa)    
Predicted Functional Partners:
A0A4Z1JBJ0
Uncharacterized protein.
   
 0.957
A0A4Z1JXQ3
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
    
 0.955
A0A4Z1JJB9
Aminotran_5 domain-containing protein.
    
 0.954
A0A4Z1JLK0
Threonine dehydratase.
   
 
 0.950
A0A4Z1JRV9
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.945
A0A4Z1JXY7
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.945
A0A4Z1K2B1
PALP domain-containing protein.
   
 
 0.925
A0A4Z1JSM0
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
     
 0.917
A0A4Z1JFD6
PALP domain-containing protein.
   
 
 0.915
A0A4Z1K6Q2
DAO domain-containing protein.
     
 0.905
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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