STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JR11Uncharacterized protein. (310 aa)    
Predicted Functional Partners:
A0A4Z1JCY3
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.760
A0A4Z1K282
Uncharacterized protein.
  
  0.509
A0A4Z1J051
Uncharacterized protein.
    
  0.505
A0A4Z1K8V2
Uncharacterized protein.
    
  0.494
A0A4Z1JLV0
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.489
A0A4Z1JR69
Uncharacterized protein.
    
  0.489
A0A4Z1IZH1
Uncharacterized protein.
    
  0.488
A0A4Z1JLY6
Uncharacterized protein.
    
  0.488
A0A4Z1JPR4
L51_S25_CI-B8 domain-containing protein.
    
  0.487
A0A4Z1KCX9
Uncharacterized protein.
    
  0.487
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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