STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JRY2Uncharacterized protein. (470 aa)    
Predicted Functional Partners:
A0A4Z1JZT7
RPOLD domain-containing protein.
   
 0.998
A0A4Z1JIS9
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.997
A0A4Z1JWL0
RNA_pol_L_2 domain-containing protein.
   
 0.997
A0A4Z1K7F5
Uncharacterized protein.
   
 0.997
A0A4Z1JFZ2
Uncharacterized protein.
   
 0.996
A0A4Z1JWL9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.996
A0A4Z1JZG0
Uncharacterized protein.
   
 0.993
A0A4Z1JAS8
Uncharacterized protein.
   
 0.990
A0A4Z1JSE1
Uncharacterized protein.
   
 0.986
A0A4Z1K5C2
Uncharacterized protein.
   
 0.980
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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