STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JTA7Sde2_N_Ubi domain-containing protein. (367 aa)    
Predicted Functional Partners:
A0A4Z1JND2
WD_REPEATS_REGION domain-containing protein.
    
 0.954
A0A4Z1K1X7
Slu7 domain-containing protein.
    
 0.948
A0A4Z1JGR2
Uncharacterized protein.
    
  0.939
A0A4Z1JCE6
Uncharacterized protein.
    
 0.925
A0A4Z1K246
Uncharacterized protein.
    
 0.923
A0A4Z1KAT1
Uncharacterized protein.
    
 
 0.902
A0A4Z1K4P4
MI domain-containing protein.
    
  0.896
A0A4Z1JVM0
Uncharacterized protein.
 
      0.890
A0A4Z1JZ53
Uncharacterized protein.
    
 
 0.882
A0A4Z1JW03
Uncharacterized protein.
    
 
 0.881
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.