STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JUH2Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (217 aa)    
Predicted Functional Partners:
A0A4Z1J3R6
Ribosomal_L7Ae domain-containing protein.
   
 0.996
A0A4Z1JNP4
Uncharacterized protein.
  
 0.996
A0A4Z1JR98
KOW domain-containing protein.
  
 0.996
A0A4Z1JXD3
Uncharacterized protein.
  
 0.996
A0A4Z1K0P5
Ribosomal_L18_c domain-containing protein.
  
 0.996
A0A4Z1K233
Ribosomal_L23eN domain-containing protein.
  
 0.996
A0A4Z1JF80
Uncharacterized protein.
   
 0.995
A0A4Z1JH24
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.995
A0A4Z1JHZ1
Uncharacterized protein.
  
 0.995
A0A4Z1JM95
Uncharacterized protein.
  
 0.995
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.