STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JVG3Uncharacterized protein. (829 aa)    
Predicted Functional Partners:
A0A4Z1JCQ0
RRM domain-containing protein.
   
 0.996
A0A4Z1K0Z6
RRM domain-containing protein.
    
 0.934
A0A4Z1J9I1
Uncharacterized protein.
    
 0.901
A0A4Z1JPW7
Nuclear cap-binding protein subunit 2.
   
 0.874
A0A4Z1JC13
AAA_11 domain-containing protein.
    
 0.861
A0A4Z1K119
Uncharacterized protein.
    
 0.861
A0A4Z1K2C3
zf-GRF domain-containing protein.
    
 0.861
A0A4Z1HC25
Uncharacterized protein.
   
 
 0.857
A0A4Z1JAK0
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 
 0.857
A0A4Z1JML3
Uncharacterized protein.
     
 0.830
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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