STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JWA1Citrate synthase; Belongs to the citrate synthase family. (472 aa)    
Predicted Functional Partners:
A0A4Z1HUC9
CoA_binding domain-containing protein.
  
 0.985
A0A4Z1IDE2
Uncharacterized protein.
  
 0.985
A0A4Z1K4I0
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.985
A0A4Z1JWS3
Malate dehydrogenase.
  
 0.983
A0A4Z1KGI1
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.977
A0A4Z1I7Q7
Malate synthase; Belongs to the malate synthase family.
   
 0.973
A0A4Z1JDD5
Uncharacterized protein.
  
 0.969
A0A4Z1JL34
Acetyl-coenzyme A synthetase.
  
 0.968
A0A4Z1IBV2
Malate dehydrogenase.
  
 0.960
A0A4Z1K1U6
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.958
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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