STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JWU5Uncharacterized protein. (501 aa)    
Predicted Functional Partners:
A0A4Z1JSH5
Uncharacterized protein.
    
 0.999
A0A4Z1K0I9
Phosphatidylinositol 3-kinase VPS34.
    
 0.999
A0A4Z1KDV4
Uncharacterized protein.
    
 0.998
A0A4Z1IYW8
Protein kinase domain-containing protein.
    
 0.997
A0A4Z1K210
Ubiquitin carboxyl-terminal hydrolase.
     
 0.980
A0A4Z1J6C9
Autophagy-related protein 3.
   
 0.904
A0A4Z1IC21
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
   
 0.899
A0A4Z1JWM8
Uncharacterized protein.
    
 0.894
A0A4Z1JPY3
Uncharacterized protein.
    
 0.889
A0A4Z1K3Q6
Autophagy-related protein.
    
 0.888
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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