A0A4Z1JY37 protein (Botrytis elliptica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4Z1JY37

Fcf2 domain-containing protein. (216 aa)

Predicted Functional Partners:

A0A4Z1JE97

0.993

A0A4Z1JX84

0.993

A0A4Z1IJH4

0.992

A0A4Z1K3M7

0.992

A0A4Z1K021

0.991

A0A4Z1JD94

0.990

A0A4Z1JFH6

0.989

A0A4Z1KBQ3

0.989

A0A4Z1JT23

0.988

A0A4Z1JP38

0.986

Your Current Organism:

Botrytis elliptica

NCBI taxonomy Id: 278938
Other names: B. elliptica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Z1IJH4	A0A4Z1JD94	Uncharacterized protein.	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	0.989
A0A4Z1IJH4	A0A4Z1JE97	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A4Z1IJH4	A0A4Z1JFH6	Uncharacterized protein.	Brix domain-containing protein.	0.991
A0A4Z1IJH4	A0A4Z1JP38	Uncharacterized protein.	PINc domain-containing protein.	0.991
A0A4Z1IJH4	A0A4Z1JT23	Uncharacterized protein.	Utp12 domain-containing protein.	0.998
A0A4Z1IJH4	A0A4Z1JX84	Uncharacterized protein.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.997
A0A4Z1IJH4	A0A4Z1JY37	Uncharacterized protein.	Fcf2 domain-containing protein.	0.992
A0A4Z1IJH4	A0A4Z1K021	Uncharacterized protein.	Bms1-type G domain-containing protein.	0.996
A0A4Z1IJH4	A0A4Z1K3M7	Uncharacterized protein.	Sas10 domain-containing protein.	0.993
A0A4Z1IJH4	A0A4Z1KBQ3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.997
A0A4Z1JD94	A0A4Z1IJH4	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	Uncharacterized protein.	0.989
A0A4Z1JD94	A0A4Z1JE97	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	Uncharacterized protein.	0.993
A0A4Z1JD94	A0A4Z1JFH6	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	Brix domain-containing protein.	0.999
A0A4Z1JD94	A0A4Z1JP38	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	PINc domain-containing protein.	0.982
A0A4Z1JD94	A0A4Z1JT23	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	Utp12 domain-containing protein.	0.999
A0A4Z1JD94	A0A4Z1JX84	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.993
A0A4Z1JD94	A0A4Z1JY37	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	Fcf2 domain-containing protein.	0.990
A0A4Z1JD94	A0A4Z1K021	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	Bms1-type G domain-containing protein.	0.998
A0A4Z1JD94	A0A4Z1K3M7	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	Sas10 domain-containing protein.	0.999
A0A4Z1JD94	A0A4Z1KBQ3	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.	WD_REPEATS_REGION domain-containing protein.	0.997