STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1K0K7Proteasome subunit beta. (235 aa)    
Predicted Functional Partners:
A0A4Z1ILX3
Proteasome subunit alpha type.
   
 0.999
A0A4Z1JB45
Proteasome subunit alpha type.
   
 0.999
A0A4Z1JB87
Proteasome subunit alpha type.
   
 0.999
A0A4Z1JC40
Proteasome subunit alpha type.
   
 0.999
A0A4Z1JJ36
Proteasome endopeptidase complex.
   
 0.999
A0A4Z1JLE7
Proteasome subunit alpha type.
   
 0.999
A0A4Z1JPM1
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
A0A4Z1JRC1
Proteasome subunit beta.
   
 0.999
A0A4Z1JUA1
Pr_beta_C domain-containing protein.
  
0.999
A0A4Z1JVW3
Uncharacterized protein.
   
 0.999
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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