STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1K2D3cobW domain-containing protein. (344 aa)    
Predicted Functional Partners:
A0A4Z1JT59
NOT2_3_5 domain-containing protein.
 
      0.898
A0A4Z1JUD6
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.833
A0A4Z1JUS6
Uncharacterized protein.
  
  
 0.736
A0A4Z1JUL2
Uncharacterized protein.
  
 
 0.713
A0A4Z1JPP6
Uncharacterized protein.
  
 
 0.703
A0A4Z1JVL8
CUE domain-containing protein.
 
      0.627
A0A4Z1JIP3
Peptidase_M24 domain-containing protein.
    
   0.542
A0A4Z1KCJ6
Uncharacterized protein.
    
   0.542
A0A4Z1K398
tRNA-synt_1e domain-containing protein.
  
  
 0.489
A0A4Z1K4L2
Histidine biosynthesis trifunctional protein.
   
 
 0.440
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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