STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1K3F7Peroxin/Ferlin domain-containing protein. (507 aa)    
Predicted Functional Partners:
A0A4Z1JPZ5
Spindle pole body component.
    
  0.777
A0A4Z1JU54
Spindle pole body component.
    
 0.695
A0A4Z1K071
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.667
A0A4Z1JBM7
Spindle pole body component.
    
 0.648
A0A4Z1JCP6
Uncharacterized protein.
    
 0.628
A0A4Z1JQQ9
Spindle pole body component.
    
 0.628
A0A4Z1JV78
Spindle pole body component.
    
 0.628
A0A4Z1JI16
Uncharacterized protein.
    
 0.608
A0A4Z1JDE0
Nucleoside diphosphate kinase.
    
 0.607
A0A4Z1JX09
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.596
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.