STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1K6I3Uncharacterized protein. (1232 aa)    
Predicted Functional Partners:
A0A4Z1JYV3
RNase_PH domain-containing protein.
    
  0.880
A0A4Z1JVA1
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
 0.823
A0A4Z1JQ14
Uncharacterized protein.
    
 
 0.780
A0A4Z1JBF5
Uncharacterized protein.
    
 0.741
A0A4Z1JZL0
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
  0.709
A0A4Z1K752
Uncharacterized protein.
   
  0.709
A0A4Z1K7W6
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
  0.709
A0A4Z1JQT7
Uncharacterized protein.
   
 0.694
A0A4Z1JVW0
Nudix hydrolase domain-containing protein.
   
 0.694
A0A4Z1K633
NTP_transf_9 domain-containing protein.
   
 0.694
Your Current Organism:
Botrytis elliptica
NCBI taxonomy Id: 278938
Other names: B. elliptica
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