A0A4Z1HJH7 protein (Botryotinia narcissicola)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4Z1HJH7

C2H2-type domain-containing protein. (151 aa)

Predicted Functional Partners:

A0A4Z1HC93

0.828

A0A4Z1IHQ2

0.828

A0A4Z1IP00

0.804

A0A4Z1IMX1

0.628

A0A4Z1J5Z5

0.600

A0A4Z1HV04

0.592

A0A4Z1INX6

0.569

A0A4Z1HVA0

0.560

A0A4Z1J4F3

0.546

A0A4Z1IUD4

0.537

Your Current Organism:

Botryotinia narcissicola

NCBI taxonomy Id: 278944
Other names: B. narcissicola, Botrytis narcissicola, Botrytis narcissicola Kleb.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Z1HC93	A0A4Z1HJH7	Uncharacterized protein.	C2H2-type domain-containing protein.	0.828
A0A4Z1HC93	A0A4Z1IHQ2	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A4Z1HC93	A0A4Z1INX6	Uncharacterized protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.450
A0A4Z1HJH7	A0A4Z1HC93	C2H2-type domain-containing protein.	Uncharacterized protein.	0.828
A0A4Z1HJH7	A0A4Z1HV04	C2H2-type domain-containing protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.592
A0A4Z1HJH7	A0A4Z1HVA0	C2H2-type domain-containing protein.	Uncharacterized protein.	0.560
A0A4Z1HJH7	A0A4Z1IHQ2	C2H2-type domain-containing protein.	Uncharacterized protein.	0.828
A0A4Z1HJH7	A0A4Z1IMX1	C2H2-type domain-containing protein.	Uncharacterized protein.	0.628
A0A4Z1HJH7	A0A4Z1INX6	C2H2-type domain-containing protein.	Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.	0.569
A0A4Z1HJH7	A0A4Z1IP00	C2H2-type domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.804
A0A4Z1HJH7	A0A4Z1IUD4	C2H2-type domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.537
A0A4Z1HJH7	A0A4Z1J4F3	C2H2-type domain-containing protein.	Uncharacterized protein.	0.546
A0A4Z1HJH7	A0A4Z1J5Z5	C2H2-type domain-containing protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.600
A0A4Z1HV04	A0A4Z1HJH7	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	C2H2-type domain-containing protein.	0.592
A0A4Z1HV04	A0A4Z1HVA0	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.816
A0A4Z1HV04	A0A4Z1IMX1	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.848
A0A4Z1HV04	A0A4Z1J4F3	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Uncharacterized protein.	0.943
A0A4Z1HVA0	A0A4Z1HJH7	Uncharacterized protein.	C2H2-type domain-containing protein.	0.560
A0A4Z1HVA0	A0A4Z1HV04	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.816
A0A4Z1HVA0	A0A4Z1IMX1	Uncharacterized protein.	Uncharacterized protein.	0.999