STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JDD4Uncharacterized protein. (705 aa)    
Predicted Functional Partners:
A0A4Z1J6L3
CLP1_P domain-containing protein.
   
 0.900
A0A4Z1HFW2
WD_REPEATS_REGION domain-containing protein.
   
 0.786
A0A4Z1HUA5
Ipi1_N domain-containing protein.
   
 0.757
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.720
A0A4Z1IFW1
Uncharacterized protein.
   
 
  0.692
A0A4Z1IBX6
Uncharacterized protein.
   
 0.683
A0A4Z1IJ22
ULP_PROTEASE domain-containing protein.
   
 0.683
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
  0.681
A0A4Z1IQN9
CP-type G domain-containing protein.
   
 
  0.663
A0A4Z1HTN0
Uncharacterized protein.
   
  0.648
Your Current Organism:
Botryotinia narcissicola
NCBI taxonomy Id: 278944
Other names: B. narcissicola, Botrytis narcissicola, Botrytis narcissicola Kleb.
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