STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Z1JI77Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (114 aa)    
Predicted Functional Partners:
A0A4Z1H8K9
Uncharacterized protein.
    
 0.998
A0A4Z1J4F3
Uncharacterized protein.
   
 0.995
A0A4Z1I7R8
TFIIB-type domain-containing protein.
   
 0.961
A0A4Z1IWL5
Uncharacterized protein.
    
 0.961
A0A4Z1J2Y2
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
   
 0.961
A0A4Z1HEL1
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
   
 0.957
A0A4Z1HEC8
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.954
A0A4Z1JBA6
RNA_pol_L_2 domain-containing protein.
   
  0.951
A0A4Z1IQ65
Uncharacterized protein.
    
 0.945
A0A4Z1J8M2
Uncharacterized protein.
   
 0.945
Your Current Organism:
Botryotinia narcissicola
NCBI taxonomy Id: 278944
Other names: B. narcissicola, Botrytis narcissicola, Botrytis narcissicola Kleb.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.