STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS41858.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (466 aa)    
Predicted Functional Partners:
OAS42027.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OAS41504.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.695
OAS42976.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.687
OAS41860.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.576
OAS41859.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
OAS42830.1
alpha-L-rhamnosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.504
Ga0100231_18910
Glycoside hydrolase family 20; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.504
OAS41866.1
Heparinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.487
OAS41521.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.478
OAS41876.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.473
Your Current Organism:
Opitutaceae bacterium TAV4
NCBI taxonomy Id: 278959
Other names: O. bacterium TAV4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.