STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS41240.1LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)    
Predicted Functional Partners:
OAS41241.1
Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.645
OAS38190.1
Acetylxylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
OAS42251.1
Acetylxylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
OAS38430.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.453
OAS38389.1
Acetylxylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.434
OAS43345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
OAS40011.1
Acetylxylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
OAS41239.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.413
OAS41086.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
  0.403
OAS41238.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.400
Your Current Organism:
Opitutaceae bacterium TAV4
NCBI taxonomy Id: 278959
Other names: O. bacterium TAV4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.