STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS41483.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)    
Predicted Functional Partners:
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.825
OAS40388.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.746
OAS41482.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.723
OAS41484.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.658
OAS42896.1
Peptidoglycan glycosyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.626
OAS42013.1
Nucleoside transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.625
OAS41485.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.624
OAS40410.1
Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.602
OAS41486.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.592
OAS42536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.586
Your Current Organism:
Opitutaceae bacterium TAV4
NCBI taxonomy Id: 278959
Other names: O. bacterium TAV4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.