STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS39965.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (747 aa)    
Predicted Functional Partners:
OAS39964.1
Phage portal protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.894
OAS39962.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.873
OAS39974.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
   0.854
OAS39969.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.822
OAS39985.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.756
OAS39971.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.727
OAS39986.1
Phage major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.721
OAS39970.1
Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.713
OAS39972.1
Phage tail protein I; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.705
OAS39991.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.701
Your Current Organism:
Opitutaceae bacterium TAV4
NCBI taxonomy Id: 278959
Other names: O. bacterium TAV4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.