STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAS43415.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
OAS43417.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.967
OAS43416.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.966
OAS38735.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.940
OAS42056.1
TonB-dependent copper receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.940
OAS43414.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.928
OAS43413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.927
OAS42825.1
Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.922
OAS42793.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.907
OAS43412.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.899
OAS43424.1
Hemin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.878
Your Current Organism:
Opitutaceae bacterium TAV4
NCBI taxonomy Id: 278959
Other names: O. bacterium TAV4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.