STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000800015_03407Unannotated protein. (240 aa)    
Predicted Functional Partners:
GCA_000800015_02925
Unannotated protein.
 
    0.570
GCA_000800015_03515
Unannotated protein.
 
   
 0.548
GCA_000800015_01953
Unannotated protein.
 
   
 0.547
GCA_000800015_00876
Unannotated protein.
 
  
 0.535
GCA_000800015_02409
Unannotated protein.
 
  
 0.524
GCA_000800015_00468
Unannotated protein.
 
  
 0.508
GCA_000800015_03081
Unannotated protein.
  
  
 0.497
GCA_000800015_01295
Unannotated protein.
 
  
 0.470
GCA_000800015_01162
Unannotated protein.
 
  
 0.459
GCA_000800015_03513
Unannotated protein.
 
     0.456
Your Current Organism:
Terriglobus sp. TAA43
NCBI taxonomy Id: 278961
Other names: Acidobacteriaceae bacterium TAA43, T. sp. TAA 43, Terriglobus sp. TAA 43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.