STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000800015_03864Unannotated protein. (419 aa)    
Predicted Functional Partners:
GCA_000800015_03865
Unannotated protein.
 
 
 0.894
GCA_000800015_03868
Unannotated protein.
 
  
 0.844
GCA_000800015_03866
Unannotated protein.
 
  
 0.839
GCA_000800015_01891
Unannotated protein.
    
 0.816
GCA_000800015_03387
Unannotated protein.
    
 0.744
GCA_000800015_00627
Unannotated protein.
 
 
 0.710
GCA_000800015_03863
Unannotated protein.
       0.697
GCA_000800015_01884
Unannotated protein.
    
 0.696
GCA_000800015_01124
Unannotated protein.
 
 
 0.692
GCA_000800015_03862
Unannotated protein.
       0.683
Your Current Organism:
Terriglobus sp. TAA43
NCBI taxonomy Id: 278961
Other names: Acidobacteriaceae bacterium TAA43, T. sp. TAA 43, Terriglobus sp. TAA 43
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.