STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000800015_03957Unannotated protein. (438 aa)    
Predicted Functional Partners:
GCA_000800015_03959
Unannotated protein.
 
 
 0.879
GCA_000800015_00420
Unannotated protein.
    
 
 0.867
GCA_000800015_03954
Unannotated protein.
 
    
0.842
GCA_000800015_03955
Unannotated protein.
 
    
0.840
GCA_000800015_03952
Unannotated protein.
 
     0.833
GCA_000800015_03951
Unannotated protein.
 
    0.825
GCA_000800015_03958
Unannotated protein.
  
 
  0.823
GCA_000800015_03953
Unannotated protein.
 
    0.815
GCA_000800015_03960
Unannotated protein.
 
    0.792
GCA_000800015_03956
Unannotated protein.
       0.781
Your Current Organism:
Terriglobus sp. TAA43
NCBI taxonomy Id: 278961
Other names: Acidobacteriaceae bacterium TAA43, T. sp. TAA 43, Terriglobus sp. TAA 43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.