STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421065_00016Unannotated protein. (290 aa)    
Predicted Functional Partners:
GCA_000421065_04906
Unannotated protein.
   
 
 0.966
GCA_000421065_04358
Unannotated protein.
   
 0.964
GCA_000421065_04354
Unannotated protein.
   
 0.959
GCA_000421065_04357
Unannotated protein.
   
 0.959
GCA_000421065_00560
Unannotated protein.
   
 0.957
GCA_000421065_04355
Unannotated protein.
   
 0.954
GCA_000421065_04352
Unannotated protein.
   
 0.952
GCA_000421065_04347
Unannotated protein.
   
  0.930
GCA_000421065_04346
Unannotated protein.
   
 0.929
GCA_000421065_04359
Unannotated protein.
   
 0.929
Your Current Organism:
Acidobacteriaceae bacterium TAA166
NCBI taxonomy Id: 278963
Other names: A. bacterium TAA166, Acidobacteriaceae bacterium TAA 166
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.