STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421065_00669Unannotated protein. (437 aa)    
Predicted Functional Partners:
GCA_000421065_00672
Unannotated protein.
    
  0.800
GCA_000421065_00670
Unannotated protein.
       0.773
GCA_000421065_00671
Unannotated protein.
       0.773
GCA_000421065_00532
Unannotated protein.
 
 
 0.701
GCA_000421065_03448
Unannotated protein.
     
 0.675
GCA_000421065_02776
Unannotated protein.
    
  0.672
GCA_000421065_05112
Unannotated protein.
    
  0.672
GCA_000421065_02673
Unannotated protein.
    
 0.605
GCA_000421065_03803
Unannotated protein.
    
 0.595
GCA_000421065_02831
Unannotated protein.
  
  
  0.594
Your Current Organism:
Acidobacteriaceae bacterium TAA166
NCBI taxonomy Id: 278963
Other names: A. bacterium TAA166, Acidobacteriaceae bacterium TAA 166
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.