STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421065_02361Unannotated protein. (275 aa)    
Predicted Functional Partners:
GCA_000421065_03161
Unannotated protein.
  
 0.959
GCA_000421065_03160
Unannotated protein.
 
  
 0.913
GCA_000421065_03353
Unannotated protein.
 
 
 0.903
GCA_000421065_04370
Unannotated protein.
 
 
 0.903
GCA_000421065_04863
Unannotated protein.
 
   
 0.871
GCA_000421065_02801
Unannotated protein.
 
   
 0.821
GCA_000421065_00946
Unannotated protein.
 
   
 0.819
GCA_000421065_00945
Unannotated protein.
 
   
 0.816
GCA_000421065_02954
Unannotated protein.
 
   
 0.810
GCA_000421065_03352
Unannotated protein.
 
   
 0.787
Your Current Organism:
Acidobacteriaceae bacterium TAA166
NCBI taxonomy Id: 278963
Other names: A. bacterium TAA166, Acidobacteriaceae bacterium TAA 166
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.