STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421065_02838Unannotated protein. (427 aa)    
Predicted Functional Partners:
GCA_000421065_02840
Unannotated protein.
  
    0.799
GCA_000421065_02839
Unannotated protein.
       0.796
GCA_000421065_02841
Unannotated protein.
       0.783
GCA_000421065_03646
Unannotated protein.
  
  
 0.573
GCA_000421065_02842
Unannotated protein.
       0.559
GCA_000421065_02837
Unannotated protein.
       0.547
GCA_000421065_00802
Unannotated protein.
 
  
 0.544
GCA_000421065_02475
Unannotated protein.
 
     0.507
GCA_000421065_02488
Unannotated protein.
     0.474
GCA_000421065_00936
Unannotated protein.
  
     0.466
Your Current Organism:
Acidobacteriaceae bacterium TAA166
NCBI taxonomy Id: 278963
Other names: A. bacterium TAA166, Acidobacteriaceae bacterium TAA 166
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.