STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421065_04134Unannotated protein. (91 aa)    
Predicted Functional Partners:
GCA_000421065_04133
Unannotated protein.
       0.790
GCA_000421065_04402
Unannotated protein.
  
     0.711
GCA_000421065_01234
Unannotated protein.
  
     0.684
GCA_000421065_04344
Unannotated protein.
  
     0.681
GCA_000421065_02428
Unannotated protein.
  
     0.635
GCA_000421065_02130
Unannotated protein.
  
     0.622
GCA_000421065_04132
Unannotated protein.
       0.612
GCA_000421065_02846
Unannotated protein.
  
     0.593
GCA_000421065_00779
Unannotated protein.
  
     0.587
GCA_000421065_04127
Unannotated protein.
 
     0.571
Your Current Organism:
Acidobacteriaceae bacterium TAA166
NCBI taxonomy Id: 278963
Other names: A. bacterium TAA166, Acidobacteriaceae bacterium TAA 166
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.