STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421065_04798Unannotated protein. (292 aa)    
Predicted Functional Partners:
GCA_000421065_03703
Unannotated protein.
   
 
 0.866
GCA_000421065_00862
Unannotated protein.
   
   0.859
GCA_000421065_00547
Unannotated protein.
    
   0.845
GCA_000421065_00548
Unannotated protein.
    
   0.845
GCA_000421065_03313
Unannotated protein.
   
   0.845
GCA_000421065_00917
Unannotated protein.
    
 
 0.843
GCA_000421065_00802
Unannotated protein.
  
 
 0.818
GCA_000421065_00888
Unannotated protein.
   
 
 0.814
GCA_000421065_00656
Unannotated protein.
  
 
 0.762
GCA_000421065_00242
Unannotated protein.
  
 
 0.761
Your Current Organism:
Acidobacteriaceae bacterium TAA166
NCBI taxonomy Id: 278963
Other names: A. bacterium TAA166, Acidobacteriaceae bacterium TAA 166
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.