STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421065_04949Unannotated protein. (249 aa)    
Predicted Functional Partners:
GCA_000421065_04948
Unannotated protein.
       0.795
GCA_000421065_03937
Unannotated protein.
 
    0.697
GCA_000421065_00767
Unannotated protein.
  
 
 0.688
GCA_000421065_02464
Unannotated protein.
  
  
 
0.654
GCA_000421065_00612
Unannotated protein.
  
 
 0.634
GCA_000421065_01098
Unannotated protein.
  
 
 0.634
GCA_000421065_02532
Unannotated protein.
   
 
 0.597
GCA_000421065_02725
Unannotated protein.
 
 
0.587
GCA_000421065_04947
Unannotated protein.
       0.565
GCA_000421065_00626
Unannotated protein.
     
 0.505
Your Current Organism:
Acidobacteriaceae bacterium TAA166
NCBI taxonomy Id: 278963
Other names: A. bacterium TAA166, Acidobacteriaceae bacterium TAA 166
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.