STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421065_04954Unannotated protein. (805 aa)    
Predicted Functional Partners:
GCA_000421065_01180
Unannotated protein.
  
 
 0.677
GCA_000421065_04887
Unannotated protein.
    
 0.666
GCA_000421065_04919
Unannotated protein.
    
 0.664
GCA_000421065_04951
Unannotated protein.
     
 0.576
GCA_000421065_04952
Unannotated protein.
  
    0.574
GCA_000421065_04953
Unannotated protein.
       0.574
GCA_000421065_01122
Unannotated protein.
  
 
 0.556
GCA_000421065_03980
Unannotated protein.
  
 
 0.556
GCA_000421065_03418
Unannotated protein.
    
 0.532
GCA_000421065_04955
Unannotated protein.
       0.524
Your Current Organism:
Acidobacteriaceae bacterium TAA166
NCBI taxonomy Id: 278963
Other names: A. bacterium TAA166, Acidobacteriaceae bacterium TAA 166
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.