STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421065_05097Unannotated protein. (722 aa)    
Predicted Functional Partners:
GCA_000421065_05096
Unannotated protein.
    
  0.740
GCA_000421065_05095
Unannotated protein.
       0.709
GCA_000421065_05098
Unannotated protein.
 
     0.704
GCA_000421065_00697
Unannotated protein.
  
     0.623
GCA_000421065_02549
Unannotated protein.
  
     0.590
GCA_000421065_02885
Unannotated protein.
  
     0.551
GCA_000421065_01663
Unannotated protein.
  
     0.540
GCA_000421065_00857
Unannotated protein.
  
     0.522
GCA_000421065_02327
Unannotated protein.
  
     0.500
GCA_000421065_03523
Unannotated protein.
  
  
  0.492
Your Current Organism:
Acidobacteriaceae bacterium TAA166
NCBI taxonomy Id: 278963
Other names: A. bacterium TAA166, Acidobacteriaceae bacterium TAA 166
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.