STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yteSConserved protein YteS. (164 aa)    
Predicted Functional Partners:
BL00023
Putative transmembrane lipoprotein.
  
    0.878
yteR
Unsaturated rhamnogalacturonyl hydrolase.
  
    0.871
yteT
Putative oxidoreductase YteT.
  
    0.752
yteU
Conserved membrane protein YteU.
  
    0.721
msmX
Multiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.695
yesR
Conserved protein YesR.
  
  
 0.620
BL00029
Hypothetical protein.
       0.601
BL00713
Glycoside Hydrolase Family 28; Belongs to the glycosyl hydrolase 28 family.
     
 0.569
yesW
Putative polysaccharide lyase family 11 protein.
      
 0.541
yvpA
Polysaccharide Lyase Family 3; Catalyzes the depolymerization of both polygalacturonate and pectins of methyl esterification degree from 22 to 89%, with an endo mode of action. In contrast to the majority of pectate lyases, displays high activity on highly methylated pectins (By similarity). Belongs to the polysaccharide lyase 3 family.
      
 0.514
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.