STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yteUConserved membrane protein YteU. (215 aa)    
Predicted Functional Partners:
yteT
Putative oxidoreductase YteT.
 
     0.842
BL00023
Putative transmembrane lipoprotein.
 
    0.785
yteR
Unsaturated rhamnogalacturonyl hydrolase.
  
    0.770
BL00029
Hypothetical protein.
 
     0.765
yteS
Conserved protein YteS.
  
    0.721
ytcQ
Putative multiple sugar transport system substrate-binding protein YtcQ.
 
     0.620
BL03024
Putative extracellular solute-binding protein, family 1.
 
     0.595
ytdP
Putative transcriptional regulator YtdP.
 
     0.593
araN
Sugar-binding protein.
 
     0.576
lplA
Lipoprotein.
 
     0.560
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.