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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL00057Putative sugar transferase, Glycosyl Transferase Family 4. (378 aa)    
Predicted Functional Partners:
BL00058
Ribosomal protein S2.
  
 
  0.686
glgB
Glycoside Hydrolase Family 13; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.634
tuaD
UDP-glucose 6-dehydrogenase TuaD.
 
  
 0.576
glgP
Glycogen phosphorylase/glycosyl transferase family 35; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.519
yerQ
Putative kinase related to diacylglycerol kinase YerQ.
   
 
  0.514
dhbF
DhbF.
    
 0.514
yqkD
Conserved protein YqkD.
    
   0.480
BL03078
Conserved hypothetical protein; Molecular Function: catalytic activity.
    
   0.480
yitV
Conserved protein,putative esterase YitV.
    
   0.480
ytpA
Probable lysophospholipase YtpA.
    
  0.456
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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