STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ywpDTwo-component sensor histidine kinase. (1030 aa)    
Predicted Functional Partners:
BL00122
Two-component response regulator; BL00122 similar to lytT from Bacillus subtilis.
 
     0.886
BL01743
Ribose ABC transporter (ribose-binding protein); BL01743 similar to rbsB from Bacillus subtilis.
  
 
 0.885
rbsB
Ribose ABC transporter (ribose-binding protein).
  
 
 0.885
yclK
Two-component sensor histidine kinase YclK.
 
 
 
0.752
ctaC
Cytochrome caa3 oxidase (subunit II); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
 
 0.727
BL00121
LPXTG-motif containing, cell wall anchor domain protein.
 
   
 0.721
lytT
Two-component response regulator.
 
  
 0.628
cheV
CheV.
   
 
 0.543
dhbF
DhbF.
  
 
 0.512
resD
Two-component response regulator ResD.
  
 
0.497
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.