Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BL00121 | yabS | BL00121 | BL00505 | LPXTG-motif containing, cell wall anchor domain protein. | YabS; Conserved hypothetical containing domain similar to von Willebrand factor,type A. | 0.447 |
| BL00121 | ywpE | BL00121 | BL00120 | LPXTG-motif containing, cell wall anchor domain protein. | Conserved protein YwpE; Sortase family protein. | 0.829 |
| dltB | yfiX | BL03933 | BL03028 | DltB; Could be involved in the transport of activated D-alanine through the membrane. | Conserved membrane protein YfiX; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.486 |
| dltB | ywpE | BL03933 | BL00120 | DltB; Could be involved in the transport of activated D-alanine through the membrane. | Conserved protein YwpE; Sortase family protein. | 0.467 |
| yabS | BL00121 | BL00505 | BL00121 | YabS; Conserved hypothetical containing domain similar to von Willebrand factor,type A. | LPXTG-motif containing, cell wall anchor domain protein. | 0.447 |
| yabS | ywpE | BL00505 | BL00120 | YabS; Conserved hypothetical containing domain similar to von Willebrand factor,type A. | Conserved protein YwpE; Sortase family protein. | 0.438 |
| ydbI | yfiX | BL05039 | BL03028 | Conserved membrane protein YdbI. | Conserved membrane protein YfiX; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.429 |
| ydbI | ywpE | BL05039 | BL00120 | Conserved membrane protein YdbI. | Conserved protein YwpE; Sortase family protein. | 0.436 |
| yfiX | dltB | BL03028 | BL03933 | Conserved membrane protein YfiX; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | DltB; Could be involved in the transport of activated D-alanine through the membrane. | 0.486 |
| yfiX | ydbI | BL03028 | BL05039 | Conserved membrane protein YfiX; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | Conserved membrane protein YdbI. | 0.429 |
| yfiX | ywpE | BL03028 | BL00120 | Conserved membrane protein YfiX; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | Conserved protein YwpE; Sortase family protein. | 0.424 |
| yfiX | yycG | BL03028 | BL02372 | Conserved membrane protein YfiX; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | Two-component sensor histidine kinase. | 0.407 |
| yhcR | ywpE | BL03173 | BL00120 | Nucleic acid-binding hydrolase YhcR. | Conserved protein YwpE; Sortase family protein. | 0.823 |
| ykzG | ywpE | BL01628 | BL00120 | Conserved hypothetical protein YkzG; Belongs to the UPF0356 family. | Conserved protein YwpE; Sortase family protein. | 0.487 |
| ywpE | BL00121 | BL00120 | BL00121 | Conserved protein YwpE; Sortase family protein. | LPXTG-motif containing, cell wall anchor domain protein. | 0.829 |
| ywpE | dltB | BL00120 | BL03933 | Conserved protein YwpE; Sortase family protein. | DltB; Could be involved in the transport of activated D-alanine through the membrane. | 0.467 |
| ywpE | yabS | BL00120 | BL00505 | Conserved protein YwpE; Sortase family protein. | YabS; Conserved hypothetical containing domain similar to von Willebrand factor,type A. | 0.438 |
| ywpE | ydbI | BL00120 | BL05039 | Conserved protein YwpE; Sortase family protein. | Conserved membrane protein YdbI. | 0.436 |
| ywpE | yfiX | BL00120 | BL03028 | Conserved protein YwpE; Sortase family protein. | Conserved membrane protein YfiX; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. | 0.424 |
| ywpE | yhcR | BL00120 | BL03173 | Conserved protein YwpE; Sortase family protein. | Nucleic acid-binding hydrolase YhcR. | 0.823 |
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