STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL00122Two-component response regulator; BL00122 similar to lytT from Bacillus subtilis. (358 aa)    
Predicted Functional Partners:
ywpD
Two-component sensor histidine kinase.
 
     0.886
BL00121
LPXTG-motif containing, cell wall anchor domain protein.
 
     0.753
lytS
Two-component sensor histidine kinase.
 
     0.595
BL01744
Putative Histidine kinase.
  
     0.535
BL05021
Conserved hypothetical protein.
  
     0.482
yesM
Two-component sensor histidine kinase YesM.
  
     0.465
ycbO
Conserved hypothetical protein YcbO.
  
     0.450
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.