STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nucBNuclease. (142 aa)    
Predicted Functional Partners:
nin
Nin.
  
  
 0.761
BL03512
Hypothetical phage tail like protein.
   
   0.754
yvfF
Polysaccharide pyruvyl transferase YvfF.
  
     0.724
ydjN
YdjN.
  
   0.701
yckB
Putative extracellular solute-binding protein YckB; Belongs to the bacterial solute-binding protein 3 family.
   
  
 0.645
scpA
Segregation and condensation protein A ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
   
  
 0.634
yckK
Putative extracellular solute-binding protein, family 3 YckK; Belongs to the bacterial solute-binding protein 3 family.
   
  
 0.627
rpsL
Ribosomal protein S12 (BS12); With S4 and S5 plays an important role in translational accuracy.
  
 
 0.615
ydhE
UDP-glycosyltransferase,Glycosyl Transferase Family 1, YdhE.
  
     0.612
BL03601
Putative ribonuclease.
      
 0.608
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.