STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydaMGlycosyl transferase, family 2. (499 aa)    
Predicted Functional Partners:
ydaJ
Putative Glycoside transferase.
 
 
 0.985
ydaL
YdaL.
 
  
 0.949
ydaK
Conserved membrane protein YdaK.
 
 
 0.916
ydaN
Putative cellulose synthase.
 
     0.890
BL03108
Putative glycosyl transferase family 2/4 protein.
 
 
 0.817
chi
Conserved protein, Glycoside Hydrolase Family 18; Chitnase; Belongs to the glycosyl hydrolase 18 family.
    
 0.810
yjeA
Putative Carbohydrate Esterase Family 4 protein; Similar to endo-1,4-beta-xylanase.
 
 
 0.783
pdaA
Putative Carbohydrate Esterase Family 4.
 
 
 0.753
ypiA
TPR-repeat containing conserved hypothetical protein.
  
 
 0.744
tuaD
UDP-glucose 6-dehydrogenase TuaD.
  
 
 0.685
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.