STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gntRTranscriptional regulator. (243 aa)    
Predicted Functional Partners:
gntK
Gluconate kinase; Belongs to the FGGY kinase family.
 
  
 0.969
gntP
Gluconate permease.
 
  
 0.914
ydhC
Putative regulatory protein.
  
     0.756
BL05370
Putative transcriptional regulator.
  
     0.743
gntZ
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
  
 0.736
BL00689
Probable transcriptional regulator.
  
     0.728
ysiA
Probable transcriptional regulator YsiA.
      
 0.724
BL00742
Putative transcriptional regulator.
  
     0.718
gabR
Transcriptional regulator GabR.
      
 0.704
araR
Transcriptional regulator.
      
 0.700
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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