STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gntRTranscriptional regulator. (243 aa)    
Predicted Functional Partners:
gntK
Gluconate kinase; Belongs to the FGGY kinase family.
 
  
 0.923
gntP
Gluconate permease.
 
  
 0.839
ydhC
Putative regulatory protein.
  
     0.756
BL05370
Putative transcriptional regulator.
  
     0.743
BL00689
Probable transcriptional regulator.
  
     0.728
BL00742
Putative transcriptional regulator.
  
     0.718
BL03804
Hypothetical DNA-binding protein,putative transcriptional regulator.
  
     0.697
gntZ
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
  
 0.675
nagP
Phosphotransferase system (PTS) N-acetylglucosamine-specific enzyme IICB component.
      
 0.613
ybgA
Transcriptional regulator.
  
   
 0.600
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.