STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahpCAlkyl hydroperoxide reductase (small subunit); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily. (187 aa)    
Predicted Functional Partners:
ahpF
Alkyl hydroperoxide reductase (large subunit) and NADH dehydrogenase.
 
  
 0.992
bsaA
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.788
ykuV
Thioredoxin domain protein YkuV.
  
 0.783
katX
Major catalase in spores; Belongs to the catalase family.
   
 
 0.770
ytpP
Putative thioredoxin YtpP.
  
 0.723
yusE
YusE.
  
 0.723
slp
Small peptidoglycan-associated lipoprotein.
  
 0.720
mrgA
Metalloregulation DNA-binding stress protein; Belongs to the Dps family.
  
  
 0.718
katA
Vegetative catalase 1; Belongs to the catalase family.
   
 
 0.710
trxB
Thioredoxin reductase.
  
 
 0.688
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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