STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bceAABC transporter,ATP/GTP-binding site motif A (P-loop). (253 aa)    
Predicted Functional Partners:
bceB
Bacitracine efflux ABC transport system permease.
 
 0.999
bceS
Histidine kinase, homodimeric.
 
 
 
 0.998
bceR
Two-component response regulator.
 
   
 0.981
yknZ
Putative ABC transporter permease.
   0.953
yxdK
Histidine kinase, homodimeric.
 
 
 
 0.823
BL00258
Two-component sensor histidine kinase. potential cognate response regulator is YxdJ.
 
 
 
 0.796
yxdM
GTP-binding signal recognition particle (SRP54) G-domain.
 
 
 0.794
BL00256
ABC transport system permease protein.
 
 
 0.725
ytrF
Possible acetoin transport system substrate binding protein YtrF.
 
 
 0.721
yclI
Hypothetical membrane protein YclI.
 
   0.652
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.