Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BL00222 | BL00223 | BL00222 | BL00223 | Hypothetical protein. | Hypothetical protein. | 0.757 |
BL00222 | BL00224 | BL00222 | BL00224 | Hypothetical protein. | Hypothetical protein. | 0.667 |
BL00222 | BL00225 | BL00222 | BL00225 | Hypothetical protein. | Putative transposase protein. | 0.723 |
BL00222 | BL00226 | BL00222 | BL00226 | Hypothetical protein. | Hypothetical protein. | 0.667 |
BL00222 | deaD | BL00222 | BL00221 | Hypothetical protein. | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. | 0.486 |
BL00223 | BL00222 | BL00223 | BL00222 | Hypothetical protein. | Hypothetical protein. | 0.757 |
BL00223 | BL00224 | BL00223 | BL00224 | Hypothetical protein. | Hypothetical protein. | 0.711 |
BL00223 | BL00225 | BL00223 | BL00225 | Hypothetical protein. | Putative transposase protein. | 0.772 |
BL00223 | BL00226 | BL00223 | BL00226 | Hypothetical protein. | Hypothetical protein. | 0.709 |
BL00223 | deaD | BL00223 | BL00221 | Hypothetical protein. | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. | 0.461 |
BL00224 | BL00222 | BL00224 | BL00222 | Hypothetical protein. | Hypothetical protein. | 0.667 |
BL00224 | BL00223 | BL00224 | BL00223 | Hypothetical protein. | Hypothetical protein. | 0.711 |
BL00224 | BL00225 | BL00224 | BL00225 | Hypothetical protein. | Putative transposase protein. | 0.739 |
BL00224 | BL00226 | BL00224 | BL00226 | Hypothetical protein. | Hypothetical protein. | 0.778 |
BL00224 | deaD | BL00224 | BL00221 | Hypothetical protein. | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. | 0.427 |
BL00225 | BL00222 | BL00225 | BL00222 | Putative transposase protein. | Hypothetical protein. | 0.723 |
BL00225 | BL00223 | BL00225 | BL00223 | Putative transposase protein. | Hypothetical protein. | 0.772 |
BL00225 | BL00224 | BL00225 | BL00224 | Putative transposase protein. | Hypothetical protein. | 0.739 |
BL00225 | BL00226 | BL00225 | BL00226 | Putative transposase protein. | Hypothetical protein. | 0.738 |
BL00225 | deaD | BL00225 | BL00221 | Putative transposase protein. | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes. | 0.447 |
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