STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yxeHHAD-superfamily hydrolase YxeH. (270 aa)    
Predicted Functional Partners:
yuxO
Conserved protein YuxO.
 
      0.895
yxeG
YxeG.
     
 0.724
BL00251
Putative D-alpha-glycerophosphatase; RamB 25kDa protein with identical N-terminal sequence was characterised to be D-alpha-glycerophosphatase in ATCC9789, Fords type B.licheniformis by Skraly and Cameron, pira changed name from mtnX to BL.
  
    0.490
yxdK
Histidine kinase, homodimeric.
    
 
 0.478
BL00250
Putative Glycerol dehydrogenase.
       0.472
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.