STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL00256ABC transport system permease protein. (628 aa)    
Predicted Functional Partners:
BL00257
ABC transport system ATP-binding protein.
 
 
 0.974
yxdM
GTP-binding signal recognition particle (SRP54) G-domain.
  
  
 
0.917
BL00258
Two-component sensor histidine kinase. potential cognate response regulator is YxdJ.
 
   
 0.908
yxdJ
Two-component response regulator. potential cognate sensor kinase is YxdK.
 
   
 0.893
yxdL
ABC transporter.
 
 
 0.863
yknX
Putative secretion protein, protein transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.785
yxdK
Histidine kinase, homodimeric.
 
   
 0.782
bceA
ABC transporter,ATP/GTP-binding site motif A (P-loop).
 
 
 0.725
yhbJ
Conserved protein YhbJ.
  
  
 0.600
yhbJ-2
Putative transporter YhbJ.
  
  
 0.600
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.