STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL00258Two-component sensor histidine kinase. potential cognate response regulator is YxdJ. (335 aa)    
Predicted Functional Partners:
yxdJ
Two-component response regulator. potential cognate sensor kinase is YxdK.
  0.980
yclK
Two-component sensor histidine kinase YclK.
 
 0.937
cheV
CheV.
   
 0.896
BL00256
ABC transport system permease protein.
 
     0.893
BL00257
ABC transport system ATP-binding protein.
 
     0.855
bceR
Two-component response regulator.
  0.846
yvrH
Two-component response regulator YvrH.
 
 0.783
BL01321
Two-component response regulator.
  0.753
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
  0.749
fliY
Flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
  0.748
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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