STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL00274ABC transporter. (230 aa)    
Predicted Functional Partners:
yknZ
Putative ABC transporter permease.
 
 
 0.965
ytrF
Possible acetoin transport system substrate binding protein YtrF.
 
   0.864
BL00273
Hypothetical protein.
       0.781
bceB
Bacitracine efflux ABC transport system permease.
  
   0.605
yclI
Hypothetical membrane protein YclI.
  
   0.605
yknX
Putative secretion protein, protein transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.532
BL00256
ABC transport system permease protein.
  
 
 0.529
yxdM
GTP-binding signal recognition particle (SRP54) G-domain.
  
 
 0.529
rplN
Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.511
dnaK
Class I heat-shock protein (molecular chaperone); Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
     0.499
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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